This paper presents a probabilistic-graphical model that can be used to infer characteristics of instantaneous brain activity by jointly analyzing spatial and temporal dependencies observed in electroencephalograms (EEG). Specifically, we describe a factor-graph-based model with customized factor-functions defined based on domain knowledge, to infer pathologic brain activity with the goal of identifying seizure-generating brain regions in epilepsy patients. We utilize an inference technique based on the graph-cut algorithm to exactly solve graph inference in polynomial time. We validate the model by using clinically collected intracranial EEG data from 29 epilepsy patients to show that the model correctly identifies seizure-generating brain regions. Our results indicate that our model outperforms two conventional approaches used for seizure-onset localization (5-7% better AUC: 0.72, 0.67, 0.65) and that the proposed inference technique provides 3-10% gain in AUC ( 0.72, 0.62, 0.69) compared to sampling-based alternatives.

Machine learning solvers for partial differential equations (PDEs) have attracted growing interest. However, most existing approaches, such as neural network solvers, rely on stochastic training, which is inefficient and typically requires a great many training epochs. Gaussian process (GP)/kernel-based solvers, while mathematical principled, suffer from scalability issues when handling large numbers of collocation points often needed for challenging or higher-dimensional PDEs. To overcome these limitations, we propose TGPS, a tensor-GP-based solver that models factor functions along each input dimension using one-dimensional GPs and combines them via tensor decomposition to approximate the full solution. This design reduces the task to learning a collection of one-dimensional GPs, substantially lowering computational complexity, and enabling scalability to massive collocation sets. For efficient nonlinear PDE solving, we use a partial freezing strategy and Newton's method to linerize the nonlinear terms. We then develop an alternating least squares (ALS) approach that admits closed-form updates, thereby substantially enhancing the training efficiency. We establish theoretical guarantees on the expressivity of our model, together with convergence proof and error analysis under standard regularity assumptions. Experiments on several benchmark PDEs demonstrate that our method achieves superior accuracy and efficiency compared to existing approaches.

Neural Information Processing Systems http://nips.cc/

We've learned how to install R and RStudio, import the dataset, and take care of missing data using the R language. Now I'm going you show you how to encode categorical data in R. If you take a look at our dataset, you'll see that we have two categorical variables. We have the county variables – Nairobi, Kisumu, and Mombasa – and we have the Purchased variables – Yes and No. They're categorical variables, obviously because they have categories. Since machine learning models are based on mathematical/numerical equations, keeping the text in the categorical variables would definitely cause us some problems. We want to have'numbers only' in our equations.

In online question-and-answer (QA) websites like Quora, one central issue is to find (invite) users who are able to provide answers to a given question and at the same time would be unlikely to say "no" to the invitation. The challenge is how to trade off the matching degree between users' expertise and the question topic, and the likelihood of positive response from the invited users. In this paper, we formally formulate the problem and develop a weakly supervised factor graph (WeakFG) model to address the problem. The model explicitly captures expertise matching degree between questions and users. To model the likelihood that an invited user is willing to answer a specific question, we incorporate a set of correlations based on social identity theory into the WeakFG model. We use two different genres of datasets: QA-Expert and Paper-Reviewer, to validate the proposed model. Our experimental results show that the proposed model can significantly outperform (+1.5-10.7% by MAP) the state-of-the-art algorithms for matching users (experts) with community questions. We have also developed an online system to further demonstrate the advantages of the proposed method.

Graphical models offer techniques for capturing the structure of many problems in real-world domains and provide means for representation, interpretation, and inference. The modeling framework provides tools for discovering rules for solving problems by exploring structural relationships. We present the Structural Affinity method that uses graphical models for first learning and subsequently recognizing the pattern for solving problems on the Raven's Progressive Matrices Test of general human intelligence. Recently there has been considerable work on computational models of addressing the Raven's test using various representations ranging from fractals to symbolic structures. In contrast, our method uses Markov Random Fields parameterized by affinity factors to discover the structure in the geometric analogy problems and induce the rules of Carpenter et al.'s cognitive model of problem-solving on the Raven's Progressive Matrices Test. We provide a computational account that first learns the structure of a Raven's problem and then predicts the solution by computing the probability of the correct answer by recognizing patterns corresponding to Carpenter et al.'s rules. We demonstrate that the performance of our model on the Standard Raven Progressive Matrices is comparable with existing state of the art models.

This paper presents a novel decentralized high-dimensional Bayesian optimization (DEC-HBO) algorithm that, in contrast to existing HBO algorithms, can exploit the interdependent effects of various input components on the output of the unknown objective function f for boosting the BO performance and still preserve scalability in the number of input dimensions without requiring prior knowledge or the existence of a low (effective) dimension of the input space. To realize this, we propose a sparse yet rich factor graph representation of f to be exploited for designing an acquisition function that can be similarly represented by a sparse factor graph and hence be efficiently optimized in a decentralized manner using distributed message passing. Despite richly characterizing the interdependent effects of the input components on the output of f with a factor graph, DEC-HBO can still guarantee no-regret performance asymptotically. Empirical evaluation on synthetic and real-world experiments (e.g., sparse Gaussian process model with 1811 hyperparameters) shows that DEC-HBO outperforms the state-of-the-art HBO algorithms.

This paper presents a novel decentralized high-dimensional Bayesian optimization (DEC-HBO) algorithm that, in contrast to existing HBO algorithms, can exploit the interdependent effects of various input components on the output of the unknown objective function f for boosting the BO performance and still preserve scalability in the number of input dimensions without requiring prior knowledge or the existence of a low (effective) dimension of the input space. To realize this, we propose a sparse yet rich factor graph representation of f to be exploited for designing an acquisition function that can be similarly represented by a sparse factor graph and hence be efficiently optimized in a decentralized manner using distributed message passing. Despite richly characterizing the interdependent effects of the input components on the output of f with a factor graph, DEC-HBO can still guarantee no-regret performance asymptotically. Empirical evaluation on synthetic and real-world experiments (e.g., sparse Gaussian process model with 1811 hyperparameters) shows that DEC-HBO outperforms the state-of-the-art HBO algorithms.

This paper presents a probabilistic-graphical model that can be used to infer characteristics of instantaneous brain activity by jointly analyzing spatial and temporal dependencies observed in electroencephalograms (EEG). Specifically, we describe a factor-graph-based model with customized factor-functions defined based on domain knowledge, to infer pathologic brain activity with the goal of identifying seizure-generating brain regions in epilepsy patients. We utilize an inference technique based on the graph-cut algorithm to exactly solve graph inference in polynomial time. We validate the model by using clinically collected intracranial EEG data from 29 epilepsy patients to show that the model correctly identifies seizure-generating brain regions. Our results indicate that our model outperforms two conventional approaches used for seizure-onset localization (5-7% better AUC: 0.72, 0.67, 0.65) and that the proposed inference technique provides 3-10% gain in AUC (0.72, 0.62, 0.69) compared to sampling-based alternatives.

Anything you'd add to the list?) Regular readers will no doubt have noticed that these are the subject areas I most often cover on The Morning Paper. I've chosen today's paper as representative of a large body of work at Stanford on a system called DeepDive. DeepDive sits at a very interesting intersection of the above topics, and its goal is to build a knowledge base – stored in a relational database – from information in large volumes of semi-structured and unstructured data. Such data is sometimes called dark data, and creating a knowledge base from it is the task of knowledge base construction (KBC).